Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Gm8000-201ENSMUST00000188378 592 ntBASIC14.89□□□□□ -0.03
Cpne8Q9DC53 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.89□□□□□ -0.03
Cpne8Q9DC53 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Cpne8Q9DC53 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Gm11594-201ENSMUST00000122313 162 ntBASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.88□□□□□ -0.03
Cpne8Q9DC53 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cpne8Q9DC53 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.87□□□□□ -0.03
Cpne8Q9DC53 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.87□□□□□ -0.03
Cpne8Q9DC53 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cpne8Q9DC53 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms