Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdc40Q9DC48 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Gm27920-201ENSMUST00000183953 96 ntBASIC13.28□□□□□ -0.28
Cdc40Q9DC48 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Cdc40Q9DC48 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cdc40Q9DC48 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.27□□□□□ -0.29
Cdc40Q9DC48 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdc40Q9DC48 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdc40Q9DC48 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms