Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gm27335-201ENSMUST00000184758 97 ntBASIC13.53□□□□□ -0.24
Upk1aQ9D132 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk1aQ9D132 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk1aQ9D132 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Upk1aQ9D132 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Upk1aQ9D132 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk1aQ9D132 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk1aQ9D132 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk1aQ9D132 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Upk1aQ9D132 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Upk1aQ9D132 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk1aQ9D132 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Upk1aQ9D132 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Upk1aQ9D132 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.52□□□□□ -0.25
Upk1aQ9D132 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.52□□□□□ -0.25
Upk1aQ9D132 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Gm10275-202ENSMUST00000168697 495 ntBASIC13.52□□□□□ -0.25
Upk1aQ9D132 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.52□□□□□ -0.25
Upk1aQ9D132 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Gm45747-201ENSMUST00000212203 999 ntBASIC13.52□□□□□ -0.25
Upk1aQ9D132 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Gm15590-201ENSMUST00000078419 552 ntBASIC13.52□□□□□ -0.25
Upk1aQ9D132 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Gm10275-201ENSMUST00000092620 635 ntBASIC13.52□□□□□ -0.25
Upk1aQ9D132 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Upk1aQ9D132 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk1aQ9D132 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Gm27628-201ENSMUST00000184911 107 ntBASIC13.51□□□□□ -0.25
Upk1aQ9D132 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.51□□□□□ -0.25
Upk1aQ9D132 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.51□□□□□ -0.25
Upk1aQ9D132 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk1aQ9D132 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.51□□□□□ -0.25
Upk1aQ9D132 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Upk1aQ9D132 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk1aQ9D132 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk1aQ9D132 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk1aQ9D132 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Upk1aQ9D132 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms