Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd1lQ9CXF7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Chd1lQ9CXF7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Chd1lQ9CXF7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chd1lQ9CXF7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Gm37861-201ENSMUST00000193534 2869 ntBASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.13■□□□□ 0.17
Chd1lQ9CXF7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chd1lQ9CXF7 Gm7787-201ENSMUST00000216858 688 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms