Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Celf4-206ENSMUST00000224553 1729 ntBASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pfdn1Q9CWM4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn1Q9CWM4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pfdn1Q9CWM4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn1Q9CWM4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Pfdn1Q9CWM4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn1Q9CWM4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn1Q9CWM4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn1Q9CWM4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn1Q9CWM4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pfdn1Q9CWM4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pfdn1Q9CWM4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pfdn1Q9CWM4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn1Q9CWM4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pfdn1Q9CWM4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn1Q9CWM4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn1Q9CWM4 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn1Q9CWM4 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.5□□□□□ -0.41
Pfdn1Q9CWM4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn1Q9CWM4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pfdn1Q9CWM4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Pfdn1Q9CWM4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms