Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm37230-201ENSMUST00000194491 818 ntBASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm45098-201ENSMUST00000207179 657 ntBASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nipsnap3bQ9CQE1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nipsnap3bQ9CQE1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nipsnap3bQ9CQE1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Nipsnap3bQ9CQE1 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nipsnap3bQ9CQE1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Nipsnap3bQ9CQE1 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.08□□□□□ -0.15
Nipsnap3bQ9CQE1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nipsnap3bQ9CQE1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm15483-201ENSMUST00000120338 456 ntBASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nipsnap3bQ9CQE1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm14140-201ENSMUST00000119999 995 ntBASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm17968-201ENSMUST00000194902 784 ntBASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm45747-201ENSMUST00000212203 999 ntBASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nipsnap3bQ9CQE1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms