Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Col25a1Q99MQ5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Gm37259-201ENSMUST00000193903 849 ntBASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Gm43818-201ENSMUST00000200605 466 ntBASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col25a1Q99MQ5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.73□□□□□ -0.05
Col25a1Q99MQ5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm29310-201ENSMUST00000185468 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21825-201ENSMUST00000185728 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm29109-201ENSMUST00000185895 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21896-201ENSMUST00000186520 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21873-201ENSMUST00000186728 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21794-201ENSMUST00000187056 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21880-201ENSMUST00000187275 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21826-201ENSMUST00000187451 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21198-201ENSMUST00000188393 696 ntBASIC14.72□□□□□ -0.05
Col25a1Q99MQ5 Gm21749-201ENSMUST00000189343 696 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms