Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gm22189-201ENSMUST00000103822 86 ntBASIC12.53□□□□□ -0.4
Scrt1Q99M85 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gm43630-201ENSMUST00000201550 776 ntBASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gm6266-201ENSMUST00000203844 806 ntBASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gm45668-201ENSMUST00000211271 493 ntBASIC12.53□□□□□ -0.4
Scrt1Q99M85 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.53□□□□□ -0.4
Scrt1Q99M85 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Scrt1Q99M85 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scrt1Q99M85 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Scrt1Q99M85 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.52□□□□□ -0.41
Scrt1Q99M85 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.52□□□□□ -0.41
Scrt1Q99M85 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scrt1Q99M85 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Gm15824-201ENSMUST00000119516 955 ntBASIC12.51□□□□□ -0.41
Scrt1Q99M85 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Mir1938-201ENSMUST00000158746 100 ntBASIC12.51□□□□□ -0.41
Scrt1Q99M85 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Gm37917-201ENSMUST00000194711 392 ntBASIC12.51□□□□□ -0.41
Scrt1Q99M85 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.51□□□□□ -0.41
Scrt1Q99M85 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scrt1Q99M85 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scrt1Q99M85 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms