Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smarcd2Q99JR8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Mir1938-201ENSMUST00000158746 100 ntBASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcd2Q99JR8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Gm43630-201ENSMUST00000201550 776 ntBASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Smarcd2Q99JR8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcd2Q99JR8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms