Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Psmb5-202ENSMUST00000227257 622 ntBASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhb3Q91XZ7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Gm8000-201ENSMUST00000188378 592 ntBASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Gm28745-201ENSMUST00000190069 305 ntBASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhb3Q91XZ7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Gm15590-201ENSMUST00000078419 552 ntBASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhb3Q91XZ7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhb3Q91XZ7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms