Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhb4Q91XZ6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhb4Q91XZ6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb4Q91XZ6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb4Q91XZ6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb4Q91XZ6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb4Q91XZ6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb4Q91XZ6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.21□□□□□ -0.14
Pcdhb4Q91XZ6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb4Q91XZ6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb4Q91XZ6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdhb4Q91XZ6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Gm44492-201ENSMUST00000197012 141 ntBASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdhb4Q91XZ6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdhb4Q91XZ6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb4Q91XZ6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms