Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trex1Q91XB0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.29■□□□□ 0.2
Trex1Q91XB0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.29■□□□□ 0.2
Trex1Q91XB0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Gm9002-201ENSMUST00000178437 499 ntBASIC16.29■□□□□ 0.2
Trex1Q91XB0 Gm5035-201ENSMUST00000215581 927 ntBASIC16.29■□□□□ 0.2
Trex1Q91XB0 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.29■□□□□ 0.2
Trex1Q91XB0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.29■□□□□ 0.2
Trex1Q91XB0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.29■□□□□ 0.2
Trex1Q91XB0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.29■□□□□ 0.2
Trex1Q91XB0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trex1Q91XB0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Gm13829-201ENSMUST00000119600 138 ntBASIC16.28■□□□□ 0.2
Trex1Q91XB0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.28■□□□□ 0.2
Trex1Q91XB0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Gm18307-201ENSMUST00000206864 949 ntBASIC16.28■□□□□ 0.2
Trex1Q91XB0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.28■□□□□ 0.2
Trex1Q91XB0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trex1Q91XB0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Gm17150-201ENSMUST00000165577 381 ntBASIC16.27■□□□□ 0.2
Trex1Q91XB0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.27■□□□□ 0.2
Trex1Q91XB0 Gm18905-201ENSMUST00000205454 928 ntBASIC16.27■□□□□ 0.2
Trex1Q91XB0 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms