Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.17■□□□□ 0.02
TraipQ8VIG6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.17■□□□□ 0.02
TraipQ8VIG6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Gm37714-201ENSMUST00000194742 342 ntBASIC15.17■□□□□ 0.02
TraipQ8VIG6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.17■□□□□ 0.02
TraipQ8VIG6 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.17■□□□□ 0.02
TraipQ8VIG6 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Gm18624-201ENSMUST00000220966 658 ntBASIC15.17■□□□□ 0.02
TraipQ8VIG6 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.17■□□□□ 0.02
TraipQ8VIG6 Gm6180-201ENSMUST00000065243 498 ntBASIC15.17■□□□□ 0.02
TraipQ8VIG6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TraipQ8VIG6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.16■□□□□ 0.02
TraipQ8VIG6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Gm5279-201ENSMUST00000199575 745 ntBASIC15.16■□□□□ 0.02
TraipQ8VIG6 Gm18027-201ENSMUST00000218947 619 ntBASIC15.16■□□□□ 0.02
TraipQ8VIG6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TraipQ8VIG6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.15■□□□□ 0.02
TraipQ8VIG6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TraipQ8VIG6 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.15■□□□□ 0.02
TraipQ8VIG6 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.14■□□□□ 0.01
TraipQ8VIG6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.14■□□□□ 0.01
TraipQ8VIG6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms