Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Gm13464-201ENSMUST00000119418 935 ntBASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa1Q8VEE4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Gm28033-201ENSMUST00000184224 96 ntBASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Gm37153-201ENSMUST00000193637 231 ntBASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpa1Q8VEE4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.4□□□□□ -0.11
Rpa1Q8VEE4 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Gm14042-201ENSMUST00000120139 833 ntBASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Gm28196-201ENSMUST00000187719 640 ntBASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Gm19087-201ENSMUST00000191430 946 ntBASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpa1Q8VEE4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Gm20614-201ENSMUST00000177106 632 ntBASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Gm4535-201ENSMUST00000182274 558 ntBASIC14.38□□□□□ -0.11
Rpa1Q8VEE4 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms