Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Gm13223-201ENSMUST00000118609 747 ntBASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Gm5479-201ENSMUST00000160578 435 ntBASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retreg1dQ8VE91 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Retreg1dQ8VE91 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Gm13464-201ENSMUST00000119418 935 ntBASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Gm27321-201ENSMUST00000185021 205 ntBASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Gm18766-201ENSMUST00000189811 808 ntBASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.17□□□□□ -0.14
Retreg1dQ8VE91 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg1dQ8VE91 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg1dQ8VE91 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms