Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sft2d2Q8VD57 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Gm12497-201ENSMUST00000138778 237 ntBASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Gm10653-202ENSMUST00000139570 835 ntBASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sft2d2Q8VD57 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Gm8749-201ENSMUST00000117737 331 ntBASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Gm4459-201ENSMUST00000118750 468 ntBASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Gm7889-201ENSMUST00000185591 958 ntBASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sft2d2Q8VD57 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms