Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Mir8117-201ENSMUST00000184773 107 ntBASIC13.69□□□□□ -0.22
Lsm1Q8VC85 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm1Q8VC85 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Lsm1Q8VC85 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.67□□□□□ -0.22
Lsm1Q8VC85 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms