Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc58Q8R3Q6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc58Q8R3Q6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Ccdc58Q8R3Q6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc58Q8R3Q6 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.83□□□□□ -0.35
Ccdc58Q8R3Q6 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Gm33142-201ENSMUST00000193913 867 ntBASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc58Q8R3Q6 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Gm8749-201ENSMUST00000117737 331 ntBASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc58Q8R3Q6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccdc58Q8R3Q6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms