Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ddx54Q8K4L0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx54Q8K4L0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx54Q8K4L0 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.52■□□□□ 0.55
Ddx54Q8K4L0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx54Q8K4L0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx54Q8K4L0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.52■□□□□ 0.55
Ddx54Q8K4L0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx54Q8K4L0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ddx54Q8K4L0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Gm11793-201ENSMUST00000120433 981 ntBASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Gm43133-201ENSMUST00000197472 463 ntBASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Olfr284-202ENSMUST00000206647 966 ntBASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ddx54Q8K4L0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Gm12203-201ENSMUST00000118235 598 ntBASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Gm12209-201ENSMUST00000120089 596 ntBASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Gm12749-201ENSMUST00000122138 1159 ntBASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Gm27772-201ENSMUST00000184900 187 ntBASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Gm37259-201ENSMUST00000193903 849 ntBASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ddx54Q8K4L0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Gm12241-201ENSMUST00000118330 726 ntBASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Gm6152-201ENSMUST00000151704 340 ntBASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Gm24420-201ENSMUST00000176676 59 ntBASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ddx54Q8K4L0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Gm10156-201ENSMUST00000122364 462 ntBASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC18.48■□□□□ 0.55
Ddx54Q8K4L0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms