Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip4Q8CI96 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip4Q8CI96 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Clip4Q8CI96 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Clip4Q8CI96 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.41□□□□□ -0.1
Clip4Q8CI96 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.41□□□□□ -0.1
Clip4Q8CI96 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Clip4Q8CI96 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.41□□□□□ -0.1
Clip4Q8CI96 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Gm18057-201ENSMUST00000208220 503 ntBASIC14.4□□□□□ -0.1
Clip4Q8CI96 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Clip4Q8CI96 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Clip4Q8CI96 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm18889-201ENSMUST00000174284 929 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm44335-201ENSMUST00000196879 141 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm44297-201ENSMUST00000198304 141 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm44346-201ENSMUST00000198851 141 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm8396-201ENSMUST00000057361 823 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.39□□□□□ -0.11
Clip4Q8CI96 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Clip4Q8CI96 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clip4Q8CI96 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms