Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox30Q8CGW4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.57■□□□□ 0.08
Sox30Q8CGW4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Gm15427-201ENSMUST00000117288 531 ntBASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 BC001981-202ENSMUST00000191393 1545 ntBASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.56■□□□□ 0.08
Sox30Q8CGW4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox30Q8CGW4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox30Q8CGW4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Sox30Q8CGW4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms