Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rdh1Q8CGV4 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rdh1Q8CGV4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rdh1Q8CGV4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Gm12585-201ENSMUST00000117307 290 ntBASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rdh1Q8CGV4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Gm12859-201ENSMUST00000117834 427 ntBASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Gm42612-201ENSMUST00000197986 623 ntBASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Gm43170-201ENSMUST00000199827 612 ntBASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rdh1Q8CGV4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rdh1Q8CGV4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.83□□□□□ -0.19
Rdh1Q8CGV4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rdh1Q8CGV4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Rdh1Q8CGV4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rdh1Q8CGV4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rdh1Q8CGV4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh1Q8CGV4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh1Q8CGV4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rdh1Q8CGV4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rdh1Q8CGV4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms