Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lysmd4Q8CC84 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Gm15173-201ENSMUST00000122049 433 ntBASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Gm10275-202ENSMUST00000168697 495 ntBASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Gm10275-201ENSMUST00000092620 635 ntBASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Lysmd4Q8CC84 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Gm45098-201ENSMUST00000207179 657 ntBASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Lysmd4Q8CC84 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Lysmd4Q8CC84 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms