Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Shd-206ENSMUST00000225145 998 ntBASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc60Q8C4J0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.5
Ccdc60Q8C4J0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Gm13223-201ENSMUST00000118609 747 ntBASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Mir1897-201ENSMUST00000122581 272 ntBASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc60Q8C4J0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Gm25144-201ENSMUST00000179561 110 ntBASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Gm25352-201ENSMUST00000179815 110 ntBASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Ccdc60Q8C4J0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Gm15957-201ENSMUST00000118893 974 ntBASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Gm6888-201ENSMUST00000221983 706 ntBASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc60Q8C4J0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms