Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Mir8102-201ENSMUST00000184148 139 ntBASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup54Q8BTS4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup54Q8BTS4 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Gm3436-201ENSMUST00000179930 840 ntBASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Mir7684-201ENSMUST00000183858 60 ntBASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Gm33320-201ENSMUST00000192232 530 ntBASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup54Q8BTS4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup54Q8BTS4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Nup54Q8BTS4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup54Q8BTS4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms