Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Gm9726-201ENSMUST00000180321 678 ntBASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Gm6973-201ENSMUST00000117080 721 ntBASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Gm14701-201ENSMUST00000117156 348 ntBASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Rprl2-201ENSMUST00000157150 290 ntBASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Mir6990-201ENSMUST00000183724 91 ntBASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cpsf4Q8BQZ5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Gm43474-201ENSMUST00000196415 774 ntBASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf4Q8BQZ5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf4Q8BQZ5 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms