Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Sfr1Q8BP27 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sfr1Q8BP27 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sfr1Q8BP27 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Sfr1Q8BP27 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Gm25948-201ENSMUST00000175334 112 ntBASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Gm5779-201ENSMUST00000218467 910 ntBASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Carlr-201ENSMUST00000181515 2574 ntBASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Sfr1Q8BP27 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Gm15693-201ENSMUST00000120470 637 ntBASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sfr1Q8BP27 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.54□□□□□ -0.08
Sfr1Q8BP27 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Sfr1Q8BP27 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms