Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc40Q8BI79 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Gm15427-201ENSMUST00000117288 531 ntBASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.92□□□□□ -0.02
Ccdc40Q8BI79 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Gm15467-201ENSMUST00000120582 445 ntBASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Gm17271-201ENSMUST00000165535 355 ntBASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Gm9182-201ENSMUST00000217829 639 ntBASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc40Q8BI79 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ccdc40Q8BI79 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms