Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Gm7774-201ENSMUST00000200064 533 ntBASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Gm45098-201ENSMUST00000207179 657 ntBASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Depdc1bQ8BH88 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Gm6973-201ENSMUST00000117080 721 ntBASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Gm14042-201ENSMUST00000120139 833 ntBASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Gm24158-201ENSMUST00000175263 71 ntBASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Depdc1bQ8BH88 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Gm18737-201ENSMUST00000173594 937 ntBASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Depdc1bQ8BH88 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms