Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Sybu-209ENSMUST00000228639 4113 ntBASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Usp6nlQ80XC3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Gm43630-201ENSMUST00000201550 776 ntBASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Gm18307-201ENSMUST00000206864 949 ntBASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Gm5425-201ENSMUST00000214125 459 ntBASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Usp6nlQ80XC3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Gm15240-201ENSMUST00000118156 720 ntBASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Gm27892-201ENSMUST00000185017 106 ntBASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Usp6nlQ80XC3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp6nlQ80XC3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Usp6nlQ80XC3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Gm11425-201ENSMUST00000119608 498 ntBASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Gm9396-201ENSMUST00000076703 567 ntBASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Usp6nlQ80XC3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms