Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm45453-201ENSMUST00000211758 853 ntBASIC15.55■□□□□ 0.08
Sh3tc2Q80VA5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3tc2Q80VA5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3tc2Q80VA5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3tc2Q80VA5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3tc2Q80VA5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3tc2Q80VA5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Mir1938-201ENSMUST00000158746 100 ntBASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Mir6392-201ENSMUST00000184924 108 ntBASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Gm6007-201ENSMUST00000208170 823 ntBASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3tc2Q80VA5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3tc2Q80VA5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Gm17150-201ENSMUST00000165577 381 ntBASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3tc2Q80VA5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3tc2Q80VA5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sh3tc2Q80VA5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms