Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Syt7-205ENSMUST00000224135 1557 ntBASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Gm15653-201ENSMUST00000119247 907 ntBASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Gm37230-201ENSMUST00000194491 818 ntBASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Dupd1-202ENSMUST00000224735 548 ntBASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Syt7-204ENSMUST00000223586 1344 ntBASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdh8Q7TSK3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Gm44855-201ENSMUST00000205725 362 ntBASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Gm16476-201ENSMUST00000221544 139 ntBASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Pcdh8Q7TSK3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh8Q7TSK3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh8Q7TSK3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh8Q7TSK3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pcdh8Q7TSK3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh8Q7TSK3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh8Q7TSK3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh8Q7TSK3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh8Q7TSK3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdh8Q7TSK3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Gm45453-201ENSMUST00000211758 853 ntBASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdh8Q7TSK3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms