Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smarcc2Q6PDG5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Gm44872-201ENSMUST00000207864 420 ntBASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc2Q6PDG5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Gm22175-201ENSMUST00000175007 78 ntBASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Gm27430-201ENSMUST00000184585 107 ntBASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Gm44333-201ENSMUST00000197168 107 ntBASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcc2Q6PDG5 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smarcc2Q6PDG5 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.64■□□□□ 0.26
Smarcc2Q6PDG5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smarcc2Q6PDG5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smarcc2Q6PDG5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Smarcc2Q6PDG5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms