Protein–RNA interactions for Protein: Q6P9P0

Slf2, SMC5-SMC6 complex localization factor protein 2, mousemouse

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf2Q6P9P0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf2Q6P9P0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf2Q6P9P0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf2Q6P9P0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf2Q6P9P0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slf2Q6P9P0 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Gm43094-201ENSMUST00000196549 921 ntBASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Gm6007-201ENSMUST00000208170 823 ntBASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slf2Q6P9P0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Gm2495-201ENSMUST00000191160 466 ntBASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Gm19078-201ENSMUST00000206311 727 ntBASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slf2Q6P9P0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slf2Q6P9P0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slf2Q6P9P0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms