Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC18.83■□□□□ 0.6
Gli3Q61602 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC18.83■□□□□ 0.6
Gli3Q61602 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Gli3Q61602 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC18.83■□□□□ 0.6
Gli3Q61602 Gm13097-201ENSMUST00000210722 397 ntBASIC18.83■□□□□ 0.6
Gli3Q61602 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC18.83■□□□□ 0.6
Gli3Q61602 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Gli3Q61602 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gli3Q61602 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gli3Q61602 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gli3Q61602 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Gli3Q61602 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gli3Q61602 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.83■□□□□ 0.6
Gli3Q61602 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gli3Q61602 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.82■□□□□ 0.6
Gli3Q61602 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gli3Q61602 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gli3Q61602 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Gli3Q61602 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC18.82■□□□□ 0.6
Gli3Q61602 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.82■□□□□ 0.6
Gli3Q61602 Gm11597-201ENSMUST00000121423 964 ntBASIC18.82■□□□□ 0.6
Gli3Q61602 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 AC139054.1-201ENSMUST00000226898 1598 ntBASIC18.82■□□□□ 0.6
Gli3Q61602 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gli3Q61602 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gli3Q61602 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Gm23270-201ENSMUST00000104055 131 ntBASIC18.81■□□□□ 0.6
Gli3Q61602 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC18.81■□□□□ 0.6
Gli3Q61602 Gm4760-201ENSMUST00000119663 1030 ntBASIC18.81■□□□□ 0.6
Gli3Q61602 Gm12363-201ENSMUST00000122250 668 ntBASIC18.81■□□□□ 0.6
Gli3Q61602 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC18.81■□□□□ 0.6
Gli3Q61602 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Gli3Q61602 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC18.81■□□□□ 0.6
Gli3Q61602 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC18.81■□□□□ 0.6
Gli3Q61602 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Gli3Q61602 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gli3Q61602 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Gli3Q61602 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gli3Q61602 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gli3Q61602 Gm25214-201ENSMUST00000104573 129 ntBASIC18.81■□□□□ 0.6
Gli3Q61602 Mir6958-201ENSMUST00000184207 73 ntBASIC18.81■□□□□ 0.6
Gli3Q61602 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC18.81■□□□□ 0.6
Gli3Q61602 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC18.81■□□□□ 0.6
Gli3Q61602 AC131330.1-201ENSMUST00000227814 1015 ntBASIC18.81■□□□□ 0.6
Gli3Q61602 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.8■□□□□ 0.6
Gli3Q61602 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gli3Q61602 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
Gli3Q61602 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gli3Q61602 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Gm9279-201ENSMUST00000223175 1606 ntBASIC18.8■□□□□ 0.6
Gli3Q61602 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Gm13316-201ENSMUST00000140537 691 ntBASIC18.8■□□□□ 0.6
Gli3Q61602 Gm8194-201ENSMUST00000159783 859 ntBASIC18.8■□□□□ 0.6
Gli3Q61602 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC18.8■□□□□ 0.6
Gli3Q61602 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gli3Q61602 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gli3Q61602 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 Prob1-201ENSMUST00000097619 3021 ntBASIC18.79■□□□□ 0.6
Gli3Q61602 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 BC037039-201ENSMUST00000192003 2205 ntBASIC18.79■□□□□ 0.6
Gli3Q61602 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gli3Q61602 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC18.79■□□□□ 0.6
Gli3Q61602 Gm8176-201ENSMUST00000191297 1099 ntBASIC18.79■□□□□ 0.6
Gli3Q61602 Gm31256-201ENSMUST00000194705 506 ntBASIC18.79■□□□□ 0.6
Gli3Q61602 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC18.79■□□□□ 0.6
Gli3Q61602 Gm18630-201ENSMUST00000222109 1397 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms