Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox17Q61473 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Sox17Q61473 Gm8584-201ENSMUST00000171982 758 ntBASIC13.41□□□□□ -0.26
Sox17Q61473 Gm45167-201ENSMUST00000208007 322 ntBASIC13.41□□□□□ -0.26
Sox17Q61473 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Sox17Q61473 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox17Q61473 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox17Q61473 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox17Q61473 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.4□□□□□ -0.26
Sox17Q61473 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sox17Q61473 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.4□□□□□ -0.26
Sox17Q61473 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.4□□□□□ -0.26
Sox17Q61473 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sox17Q61473 Gm14042-201ENSMUST00000120139 833 ntBASIC13.4□□□□□ -0.26
Sox17Q61473 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.4□□□□□ -0.26
Sox17Q61473 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.4□□□□□ -0.26
Sox17Q61473 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sox17Q61473 Gm33142-201ENSMUST00000193913 867 ntBASIC13.4□□□□□ -0.26
Sox17Q61473 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.4□□□□□ -0.26
Sox17Q61473 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.4□□□□□ -0.26
Sox17Q61473 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.4□□□□□ -0.26
Sox17Q61473 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.4□□□□□ -0.26
Sox17Q61473 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Sox17Q61473 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.4□□□□□ -0.26
Sox17Q61473 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.4□□□□□ -0.26
Sox17Q61473 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sox17Q61473 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sox17Q61473 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Sox17Q61473 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Sox17Q61473 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.4□□□□□ -0.27
Sox17Q61473 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.39□□□□□ -0.27
Sox17Q61473 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.39□□□□□ -0.27
Sox17Q61473 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.39□□□□□ -0.27
Sox17Q61473 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sox17Q61473 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Sox17Q61473 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms