Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Mir7684-201ENSMUST00000183858 60 ntBASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps54Q5SPW0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps54Q5SPW0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Gm14719-201ENSMUST00000121891 340 ntBASIC17.1■□□□□ 0.33
Vps54Q5SPW0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Gm3436-201ENSMUST00000179930 840 ntBASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.1■□□□□ 0.33
Vps54Q5SPW0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps54Q5SPW0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Gm33320-201ENSMUST00000192232 530 ntBASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps54Q5SPW0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms