Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav3-3Q5R1C3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Mir770-201ENSMUST00000103252 94 ntBASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav3-3Q5R1C3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Gm15565-201ENSMUST00000118890 427 ntBASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Trav3-3Q5R1C3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav3-3Q5R1C3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms