Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Prpf38aQ4FK66 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Gm14928-201ENSMUST00000120198 477 ntBASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38aQ4FK66 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Gm4804-201ENSMUST00000182234 999 ntBASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38aQ4FK66 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.61■□□□□ 0.25
Prpf38aQ4FK66 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms