Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col5a2Q3U962 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col5a2Q3U962 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.72■□□□□ 0.27
Col5a2Q3U962 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Gm3786-201ENSMUST00000202659 378 ntBASIC16.72■□□□□ 0.27
Col5a2Q3U962 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.72■□□□□ 0.27
Col5a2Q3U962 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.72■□□□□ 0.27
Col5a2Q3U962 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col5a2Q3U962 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.71■□□□□ 0.27
Col5a2Q3U962 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.71■□□□□ 0.27
Col5a2Q3U962 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col5a2Q3U962 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col5a2Q3U962 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.7■□□□□ 0.26
Col5a2Q3U962 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.7■□□□□ 0.26
Col5a2Q3U962 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.7■□□□□ 0.26
Col5a2Q3U962 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col5a2Q3U962 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.69■□□□□ 0.26
Col5a2Q3U962 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.69■□□□□ 0.26
Col5a2Q3U962 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Gm13786-201ENSMUST00000122371 333 ntBASIC16.69■□□□□ 0.26
Col5a2Q3U962 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.69■□□□□ 0.26
Col5a2Q3U962 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col5a2Q3U962 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col5a2Q3U962 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col5a2Q3U962 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col5a2Q3U962 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col5a2Q3U962 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.68■□□□□ 0.26
Col5a2Q3U962 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col5a2Q3U962 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.68■□□□□ 0.26
Col5a2Q3U962 Gm7029-201ENSMUST00000173226 450 ntBASIC16.68■□□□□ 0.26
Col5a2Q3U962 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.68■□□□□ 0.26
Col5a2Q3U962 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Col5a2Q3U962 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col5a2Q3U962 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms