Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.05□□□□□ -0.16
Q3KNL4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.05□□□□□ -0.16
Q3KNL4 Gm27301-201ENSMUST00000184012 127 ntBASIC14.05□□□□□ -0.16
Q3KNL4 Mzt1-203ENSMUST00000227948 952 ntBASIC14.05□□□□□ -0.16
Q3KNL4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Q3KNL4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q3KNL4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q3KNL4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q3KNL4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q3KNL4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q3KNL4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Q3KNL4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Q3KNL4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Q3KNL4 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Gm14140-201ENSMUST00000119999 995 ntBASIC14.04□□□□□ -0.16
Q3KNL4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Gm45098-201ENSMUST00000207179 657 ntBASIC14.04□□□□□ -0.16
Q3KNL4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.04□□□□□ -0.16
Q3KNL4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Q3KNL4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Q3KNL4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.04□□□□□ -0.16
Q3KNL4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q3KNL4 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Q3KNL4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Q3KNL4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.03□□□□□ -0.16
Q3KNL4 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.03□□□□□ -0.16
Q3KNL4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.03□□□□□ -0.16
Q3KNL4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.03□□□□□ -0.16
Q3KNL4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Q3KNL4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Q3KNL4 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Q3KNL4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3KNL4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Q3KNL4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3KNL4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3KNL4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3KNL4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Q3KNL4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.02□□□□□ -0.17
Q3KNL4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Q3KNL4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.02□□□□□ -0.17
Q3KNL4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Q3KNL4 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.02□□□□□ -0.17
Q3KNL4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Q3KNL4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Q3KNL4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3KNL4 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Q3KNL4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms