Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nhej1Q3KNJ2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nhej1Q3KNJ2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nhej1Q3KNJ2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nhej1Q3KNJ2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nhej1Q3KNJ2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nhej1Q3KNJ2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nhej1Q3KNJ2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nhej1Q3KNJ2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Gm9385-201ENSMUST00000117563 472 ntBASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nhej1Q3KNJ2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Nhej1Q3KNJ2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nhej1Q3KNJ2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Gm10819-201ENSMUST00000099988 561 ntBASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nhej1Q3KNJ2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms