Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab42Q0PD08 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab42Q0PD08 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rab42Q0PD08 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.66□□□□□ -0.38
Rab42Q0PD08 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.66□□□□□ -0.38
Rab42Q0PD08 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rab42Q0PD08 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Gm7222-201ENSMUST00000117512 906 ntBASIC12.65□□□□□ -0.38
Rab42Q0PD08 Gm18489-201ENSMUST00000172565 551 ntBASIC12.65□□□□□ -0.38
Rab42Q0PD08 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rab42Q0PD08 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.64□□□□□ -0.39
Rab42Q0PD08 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.64□□□□□ -0.39
Rab42Q0PD08 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.64□□□□□ -0.39
Rab42Q0PD08 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.64□□□□□ -0.39
Rab42Q0PD08 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.64□□□□□ -0.39
Rab42Q0PD08 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rab42Q0PD08 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms