Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Chd8Q09XV5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.64□□□□□ -0.39
Chd8Q09XV5 Spcs1-203ENSMUST00000226374 592 ntBASIC12.64□□□□□ -0.39
Chd8Q09XV5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Gm8325-201ENSMUST00000099086 453 ntBASIC12.64□□□□□ -0.39
Chd8Q09XV5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chd8Q09XV5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gm21470-201ENSMUST00000187680 696 ntBASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.63□□□□□ -0.39
Chd8Q09XV5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.63□□□□□ -0.39
Chd8Q09XV5 Gm43778-201ENSMUST00000199438 199 ntBASIC12.63□□□□□ -0.39
Chd8Q09XV5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.63□□□□□ -0.39
Chd8Q09XV5 Morn2-202ENSMUST00000227729 656 ntBASIC12.63□□□□□ -0.39
Chd8Q09XV5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chd8Q09XV5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.62□□□□□ -0.39
Chd8Q09XV5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm14208-201ENSMUST00000119645 678 ntBASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm12029-201ENSMUST00000120073 832 ntBASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chd8Q09XV5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms