Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 PMM2-210ENST00000566196 531 ntTSL 410.01□□□□□ -0.813e-10■□□□□ 8
SRSF1Q07955 PMM2-205ENST00000564030 1036 ntTSL 29.7□□□□□ -0.863e-10■□□□□ 8
SRSF1Q07955 PMM2-209ENST00000565896 514 ntTSL 49.14□□□□□ -0.953e-10■□□□□ 8
SRSF1Q07955 PMM2-213ENST00000566983 907 ntTSL 5 BASIC8.3□□□□□ -1.083e-10■□□□□ 8
SRSF1Q07955 PMM2-215ENST00000568602 550 ntTSL 56.72□□□□□ -1.333e-10■□□□□ 8
SRSF1Q07955 PMM2-217ENST00000570076 1002 ntTSL 26.65□□□□□ -1.343e-10■□□□□ 8
SRSF1Q07955 PMM2-206ENST00000564069 567 ntTSL 45.94□□□□□ -1.463e-10■□□□□ 8
SRSF1Q07955 SF1-208ENST00000432725 475 ntTSL 414.65□□□□□ -0.064e-12■□□□□ 8
SRSF1Q07955 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.36□□□□□ -0.112e-8■□□□□ 8
SRSF1Q07955 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.12□□□□□ -0.312e-8■□□□□ 8
SRSF1Q07955 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.1□□□□□ -0.312e-8■□□□□ 8
SRSF1Q07955 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.17□□□□□ -0.464e-12■□□□□ 8
SRSF1Q07955 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.7□□□□□ -0.542e-8■□□□□ 8
SRSF1Q07955 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.66□□□□□ -0.72e-8■□□□□ 8
SRSF1Q07955 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC9.53□□□□□ -0.882e-8■□□□□ 8
SRSF1Q07955 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC9.35□□□□□ -0.912e-8■□□□□ 8
SRSF1Q07955 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.322e-8■□□□□ 8
SRSF1Q07955 MIER1-210ENST00000479067 745 ntTSL 54.66□□□□□ -1.662e-8■□□□□ 8
SRSF1Q07955 DNM2-221ENST00000593203 2507 ntTSL 211.74□□□□□ -0.539e-9■□□□□ 8
SRSF1Q07955 ZC3H15-203ENST00000437396 556 ntTSL 49.99□□□□□ -0.812e-7■□□□□ 8
SRSF1Q07955 ZC3H15-202ENST00000421536 1101 ntTSL 27.65□□□□□ -1.182e-7■□□□□ 8
SRSF1Q07955 ZC3H15-207ENST00000481101 558 ntTSL 44.86□□□□□ -1.632e-7■□□□□ 8
SRSF1Q07955 ZC3H15-205ENST00000468120 601 ntTSL 44.82□□□□□ -1.642e-7■□□□□ 8
SRSF1Q07955 ZC3H15-208ENST00000496289 554 ntTSL 54.41□□□□□ -1.72e-7■□□□□ 8
SRSF1Q07955 SLC17A9-203ENST00000411611 565 ntTSL 213.03□□□□□ -0.322e-15■□□□□ 8
SRSF1Q07955 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.422e-15■□□□□ 8
SRSF1Q07955 SLC17A9-207ENST00000488738 3992 ntTSL 29.87□□□□□ -0.832e-15■□□□□ 8
SRSF1Q07955 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.862e-15■□□□□ 8
SRSF1Q07955 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC8.38□□□□□ -1.073e-8■□□□□ 8
SRSF1Q07955 SYNJ2-203ENST00000367113 939 ntTSL 27.32□□□□□ -1.243e-8■□□□□ 8
SRSF1Q07955 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.27■■□□□ 1.161e-7■□□□□ 8
SRSF1Q07955 PCMTD2-211ENST00000610196 476 ntTSL 318■□□□□ 0.471e-7■□□□□ 8
SRSF1Q07955 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.14□□□□□ -0.151e-7■□□□□ 8
SRSF1Q07955 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.78□□□□□ -0.681e-7■□□□□ 8
SRSF1Q07955 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.111e-7■□□□□ 8
SRSF1Q07955 PCMTD2-208ENST00000609764 572 ntTSL 46.94□□□□□ -1.31e-7■□□□□ 8
Retrieved 36 of 14,836 protein–RNA pairs in 44.6 ms