Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 PMM2-210ENST00000566196 531 ntTSL 410.01□□□□□ -0.813e-10■□□□□ 8
SRSF1Q07955 PMM2-205ENST00000564030 1036 ntTSL 29.7□□□□□ -0.863e-10■□□□□ 8
SRSF1Q07955 PMM2-209ENST00000565896 514 ntTSL 49.14□□□□□ -0.953e-10■□□□□ 8
SRSF1Q07955 PMM2-213ENST00000566983 907 ntTSL 5 BASIC8.3□□□□□ -1.083e-10■□□□□ 8
SRSF1Q07955 PMM2-215ENST00000568602 550 ntTSL 56.72□□□□□ -1.333e-10■□□□□ 8
SRSF1Q07955 PMM2-217ENST00000570076 1002 ntTSL 26.65□□□□□ -1.343e-10■□□□□ 8
SRSF1Q07955 PMM2-206ENST00000564069 567 ntTSL 45.94□□□□□ -1.463e-10■□□□□ 8
SRSF1Q07955 SF1-208ENST00000432725 475 ntTSL 414.65□□□□□ -0.064e-12■□□□□ 8
SRSF1Q07955 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.36□□□□□ -0.112e-8■□□□□ 8
SRSF1Q07955 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC13.12□□□□□ -0.312e-8■□□□□ 8
SRSF1Q07955 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.1□□□□□ -0.312e-8■□□□□ 8
SRSF1Q07955 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.17□□□□□ -0.464e-12■□□□□ 8
SRSF1Q07955 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.7□□□□□ -0.542e-8■□□□□ 8
SRSF1Q07955 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC10.66□□□□□ -0.72e-8■□□□□ 8
SRSF1Q07955 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC9.53□□□□□ -0.882e-8■□□□□ 8
SRSF1Q07955 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC9.35□□□□□ -0.912e-8■□□□□ 8
SRSF1Q07955 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.322e-8■□□□□ 8
SRSF1Q07955 MIER1-210ENST00000479067 745 ntTSL 54.66□□□□□ -1.662e-8■□□□□ 8
SRSF1Q07955 DNM2-221ENST00000593203 2507 ntTSL 211.74□□□□□ -0.539e-9■□□□□ 8
SRSF1Q07955 ZC3H15-203ENST00000437396 556 ntTSL 49.99□□□□□ -0.812e-7■□□□□ 8
SRSF1Q07955 ZC3H15-202ENST00000421536 1101 ntTSL 27.65□□□□□ -1.182e-7■□□□□ 8
SRSF1Q07955 ZC3H15-207ENST00000481101 558 ntTSL 44.86□□□□□ -1.632e-7■□□□□ 8
SRSF1Q07955 ZC3H15-205ENST00000468120 601 ntTSL 44.82□□□□□ -1.642e-7■□□□□ 8
SRSF1Q07955 ZC3H15-208ENST00000496289 554 ntTSL 54.41□□□□□ -1.72e-7■□□□□ 8
SRSF1Q07955 SLC17A9-203ENST00000411611 565 ntTSL 213.03□□□□□ -0.322e-15■□□□□ 8
SRSF1Q07955 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.422e-15■□□□□ 8
SRSF1Q07955 SLC17A9-207ENST00000488738 3992 ntTSL 29.87□□□□□ -0.832e-15■□□□□ 8
SRSF1Q07955 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.862e-15■□□□□ 8
SRSF1Q07955 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC8.38□□□□□ -1.073e-8■□□□□ 8
SRSF1Q07955 SYNJ2-203ENST00000367113 939 ntTSL 27.32□□□□□ -1.243e-8■□□□□ 8
SRSF1Q07955 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.27■■□□□ 1.161e-7■□□□□ 8
SRSF1Q07955 PCMTD2-211ENST00000610196 476 ntTSL 318■□□□□ 0.471e-7■□□□□ 8
SRSF1Q07955 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.14□□□□□ -0.151e-7■□□□□ 8
SRSF1Q07955 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC10.78□□□□□ -0.681e-7■□□□□ 8
SRSF1Q07955 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.111e-7■□□□□ 8
SRSF1Q07955 PCMTD2-208ENST00000609764 572 ntTSL 46.94□□□□□ -1.31e-7■□□□□ 8
Retrieved 36 of 14,836 protein–RNA pairs in 51.5 ms