Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Gm14701-201ENSMUST00000117156 348 ntBASIC12.55□□□□□ -0.4
Thbs3Q05895 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Gm18766-201ENSMUST00000189811 808 ntBASIC12.55□□□□□ -0.4
Thbs3Q05895 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Thbs3Q05895 AA619741-201ENSMUST00000195095 646 ntBASIC12.55□□□□□ -0.4
Thbs3Q05895 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.54□□□□□ -0.4
Thbs3Q05895 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Gm9719-201ENSMUST00000162765 543 ntBASIC12.54□□□□□ -0.4
Thbs3Q05895 Gm29541-201ENSMUST00000191351 678 ntBASIC12.54□□□□□ -0.4
Thbs3Q05895 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.54□□□□□ -0.4
Thbs3Q05895 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Thbs3Q05895 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs3Q05895 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.53□□□□□ -0.4
Thbs3Q05895 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.53□□□□□ -0.4
Thbs3Q05895 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Thbs3Q05895 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Thbs3Q05895 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.53□□□□□ -0.4
Thbs3Q05895 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Gm5566-201ENSMUST00000116118 459 ntBASIC12.53□□□□□ -0.4
Thbs3Q05895 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.53□□□□□ -0.4
Thbs3Q05895 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Gm45453-201ENSMUST00000211758 853 ntBASIC12.53□□□□□ -0.4
Thbs3Q05895 Gm5779-201ENSMUST00000218467 910 ntBASIC12.53□□□□□ -0.4
Thbs3Q05895 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Thbs3Q05895 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs3Q05895 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms