Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.88□□□□□ -0.19
Msx2Q03358 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.88□□□□□ -0.19
Msx2Q03358 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Msx2Q03358 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Msx2Q03358 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Msx2Q03358 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.88□□□□□ -0.19
Msx2Q03358 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.88□□□□□ -0.19
Msx2Q03358 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.88□□□□□ -0.19
Msx2Q03358 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Msx2Q03358 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.88□□□□□ -0.19
Msx2Q03358 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.88□□□□□ -0.19
Msx2Q03358 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Msx2Q03358 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Msx2Q03358 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.87□□□□□ -0.19
Msx2Q03358 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.87□□□□□ -0.19
Msx2Q03358 Mir7071-201ENSMUST00000184847 69 ntBASIC13.87□□□□□ -0.19
Msx2Q03358 Gm17807-201ENSMUST00000186869 298 ntBASIC13.87□□□□□ -0.19
Msx2Q03358 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Msx2Q03358 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.87□□□□□ -0.19
Msx2Q03358 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Msx2Q03358 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.86□□□□□ -0.19
Msx2Q03358 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.86□□□□□ -0.19
Msx2Q03358 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Msx2Q03358 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Msx2Q03358 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.86□□□□□ -0.19
Msx2Q03358 Gm7787-201ENSMUST00000216858 688 ntBASIC13.86□□□□□ -0.19
Msx2Q03358 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Msx2Q03358 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.86□□□□□ -0.19
Msx2Q03358 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Msx2Q03358 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Msx2Q03358 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Msx2Q03358 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms