Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrn1P97789 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrn1P97789 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Xrn1P97789 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC19.92■□□□□ 0.78
Xrn1P97789 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Xrn1P97789 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrn1P97789 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC19.92■□□□□ 0.78
Xrn1P97789 Rn7s1-201ENSMUST00000174924 300 ntBASIC19.92■□□□□ 0.78
Xrn1P97789 Rn7s2-201ENSMUST00000175032 300 ntBASIC19.92■□□□□ 0.78
Xrn1P97789 Gm26461-201ENSMUST00000175064 290 ntBASIC19.92■□□□□ 0.78
Xrn1P97789 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC19.92■□□□□ 0.78
Xrn1P97789 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrn1P97789 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Xrn1P97789 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC19.92■□□□□ 0.78
Xrn1P97789 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrn1P97789 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Xrn1P97789 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Xrn1P97789 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrn1P97789 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Xrn1P97789 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrn1P97789 Gm22323-201ENSMUST00000103832 109 ntBASIC19.91■□□□□ 0.78
Xrn1P97789 Gm15808-201ENSMUST00000119046 604 ntBASIC19.91■□□□□ 0.78
Xrn1P97789 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC19.91■□□□□ 0.78
Xrn1P97789 Gm6222-202ENSMUST00000182143 629 ntBASIC19.91■□□□□ 0.78
Xrn1P97789 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC19.91■□□□□ 0.78
Xrn1P97789 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC19.91■□□□□ 0.78
Xrn1P97789 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrn1P97789 Gm44645-201ENSMUST00000205492 1653 ntBASIC19.91■□□□□ 0.78
Xrn1P97789 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC19.91■□□□□ 0.78
Xrn1P97789 Gm3756-201ENSMUST00000169182 1355 ntBASIC19.91■□□□□ 0.78
Xrn1P97789 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrn1P97789 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrn1P97789 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrn1P97789 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Xrn1P97789 Gm14608-201ENSMUST00000120030 1553 ntBASIC19.91■□□□□ 0.78
Xrn1P97789 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrn1P97789 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Xrn1P97789 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.91■□□□□ 0.78
Xrn1P97789 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Gm16479-201ENSMUST00000121706 932 ntBASIC19.9■□□□□ 0.78
Xrn1P97789 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Xrn1P97789 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.9■□□□□ 0.78
Xrn1P97789 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC19.9■□□□□ 0.78
Xrn1P97789 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Xrn1P97789 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Xrn1P97789 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Xrn1P97789 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC19.89■□□□□ 0.78
Xrn1P97789 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Xrn1P97789 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Xrn1P97789 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Xrn1P97789 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.89■□□□□ 0.77
Xrn1P97789 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC19.89■□□□□ 0.77
Xrn1P97789 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Xrn1P97789 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC19.89■□□□□ 0.77
Xrn1P97789 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC19.89■□□□□ 0.77
Xrn1P97789 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC19.89■□□□□ 0.77
Xrn1P97789 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.89■□□□□ 0.77
Xrn1P97789 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Xrn1P97789 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Abhd6-203ENSMUST00000225234 1958 ntBASIC19.88■□□□□ 0.77
Xrn1P97789 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Gm2991-201ENSMUST00000173338 480 ntBASIC19.88■□□□□ 0.77
Xrn1P97789 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC19.88■□□□□ 0.77
Xrn1P97789 AC134335.2-201ENSMUST00000227660 440 ntBASIC19.88■□□□□ 0.77
Xrn1P97789 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Gm38102-201ENSMUST00000192791 1935 ntBASIC19.88■□□□□ 0.77
Xrn1P97789 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Xrn1P97789 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms