Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 AA619741-201ENSMUST00000195095 646 ntBASIC13.38□□□□□ -0.27
Six5P70178 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.38□□□□□ -0.27
Six5P70178 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Six5P70178 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.38□□□□□ -0.27
Six5P70178 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.38□□□□□ -0.27
Six5P70178 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Six5P70178 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Six5P70178 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.38□□□□□ -0.27
Six5P70178 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Six5P70178 Gm15693-201ENSMUST00000120470 637 ntBASIC13.37□□□□□ -0.27
Six5P70178 Gm6222-201ENSMUST00000120787 396 ntBASIC13.37□□□□□ -0.27
Six5P70178 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.37□□□□□ -0.27
Six5P70178 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Six5P70178 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.37□□□□□ -0.27
Six5P70178 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Six5P70178 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Six5P70178 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Six5P70178 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.36□□□□□ -0.27
Six5P70178 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.36□□□□□ -0.27
Six5P70178 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Gm5566-201ENSMUST00000116118 459 ntBASIC13.36□□□□□ -0.27
Six5P70178 Gm13823-201ENSMUST00000119930 345 ntBASIC13.36□□□□□ -0.27
Six5P70178 Gm29541-201ENSMUST00000191351 678 ntBASIC13.36□□□□□ -0.27
Six5P70178 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Six5P70178 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Six5P70178 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.36□□□□□ -0.27
Six5P70178 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.36□□□□□ -0.27
Six5P70178 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Six5P70178 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Six5P70178 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six5P70178 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.35□□□□□ -0.27
Six5P70178 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six5P70178 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Six5P70178 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Six5P70178 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Six5P70178 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms