Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lhx1P63006 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lhx1P63006 Syt7-204ENSMUST00000223586 1344 ntBASIC14.01□□□□□ -0.17
Lhx1P63006 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.01□□□□□ -0.17
Lhx1P63006 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lhx1P63006 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.01□□□□□ -0.17
Lhx1P63006 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.01□□□□□ -0.17
Lhx1P63006 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.01□□□□□ -0.17
Lhx1P63006 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.01□□□□□ -0.17
Lhx1P63006 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx1P63006 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Lhx1P63006 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lhx1P63006 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lhx1P63006 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Gm9109-201ENSMUST00000120254 1405 ntBASIC14□□□□□ -0.17
Lhx1P63006 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14□□□□□ -0.17
Lhx1P63006 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Lhx1P63006 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14□□□□□ -0.17
Lhx1P63006 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Gm24694-201ENSMUST00000180054 110 ntBASIC14□□□□□ -0.17
Lhx1P63006 Gm27663-201ENSMUST00000184839 110 ntBASIC14□□□□□ -0.17
Lhx1P63006 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 AC153872.1-201ENSMUST00000199539 128 ntBASIC14□□□□□ -0.17
Lhx1P63006 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lhx1P63006 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Lhx1P63006 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lhx1P63006 Gm45630-201ENSMUST00000210243 1911 ntBASIC14□□□□□ -0.17
Lhx1P63006 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lhx1P63006 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.99□□□□□ -0.17
Lhx1P63006 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Lhx1P63006 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Lhx1P63006 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx1P63006 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.99□□□□□ -0.17
Lhx1P63006 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.99□□□□□ -0.17
Lhx1P63006 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lhx1P63006 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.99□□□□□ -0.17
Lhx1P63006 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Lhx1P63006 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.99□□□□□ -0.17
Lhx1P63006 Gm7730-201ENSMUST00000212486 454 ntBASIC13.99□□□□□ -0.17
Lhx1P63006 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lhx1P63006 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lhx1P63006 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms